Keep in mind that an HT can still coexist without a "real" HT bypass. I have posted here on AC regularly that a pre with HT bypass is a cornerstone of HT/stereo marriage. However, I currently own a great preamp (Concert Fidelity CF-080) that has no HT bypass.
All one needs to do is dedicate an input to the HT (front l/r's of the processor/receiver) and then choose a volume position that is both high in signal /noise (meaning not a real low preamp volume) and one that can be remembered by you or your family. I also don't recommend MAX volume cuz if one forgets and changes inputs you'll get blown out of the room (and maybe a speaker driver or two, too).

I would recommend high noon for those volume controls that have no numerical output, or, if a numerical readout, some number high in the 70+% range of the volume that is easy to remember. Set the volume of the pre there, put down/away your preamp volume remote control, calibrate your HT channel trims with your HT remote, and leave the pre volume there every time you watch a movie, etc. Yes, in theory, your front HT channels are now being "processed" by the preamp, but so what.