In a nutshell, a woofer radiates in all direction at low frequencies, and forwards only at higher frequencies. Because of this, the anechoic on-axis signal level measured at low frequencies will be 6 dB less than at high frequencies. So this needs to be adjusted for in the crossover; typically less than 6 dB adjustment is used because woofers are used in real (reflective) rooms not anechoic chambers.
The frequency over which this transition occurs is determined by the size of the baffle. So changing the baffle size will make the compensation built into the crossover "off" by some degree.