You cannot use a regular Y-cable to combine 2 RCA connections into one. There are cables out there you can use, but you need more than that in my opinion. Anti-Mode sells a cable with this feature for about $100.00.
I run a sub for music and always will. The reason is that bass frequencies fall victim to the room and require some sort of EQ to provide a flat frequency response below 100Hz. As such, you should be running some sort of EQ device such as a Velodyne SMS-1 or a Anti-Mode. The bonus to running one of these devices is that it's not only and EQ device, but also combines stereo RCA inputs into a single mono output for the sub.
What sub are you using? Does it have a single mono RCA input?
For the record, I run dual subs off my Rogue preamp's secondary outputs. I use an SMS-1 to EQ my subs. I also use FMOD filters to high-pass my main speakers.