Another idea to try (not saying it will help, but it could):
Try to isolate the transformer from the case somewhat, by placing a dampening spacer of some sort between. a couple of large rubber washers might work, or dynamat could help. The idea is if the transformer is vibrating (touch it if you can to see) this can couple to the amp through the chassis it is bolted to.
You can try the DC filter idea.
For kicks also try moving the two black leaded wires further away from the yellow wires. If they are easiely disconnected, try twisting them a bit.