Upgrading to the Ultimate PS will have a greater impact on the entire quality of the unit's operation than any clock mod.
The internal switching power supply does throw a lot of noise into the DC lines. The latest mods I do reduce this noise, but it is still there.
Running any leads from the digital circuit to an external board will be subject to noise pick-up. Adding an external clock will create more problems with noise pick-up that it might solve.
I first tried using a digital isolation transformer on an early SB2 mod. It picked up a LOT of noise from the leads required to connect it to the board and digital connector. I ended up removing it and the sound was quite a bit better.
You are always welcome to try it out yourself. I will not offer any clock mods.