You need to get a multi meter and compare the voltages between the good and bad channel. A cold solder joint, or a misplaced wire often is the cause of these types of problems. Once you see where the voltage readings take you, may need to check out components such as resistors to see if they are in tolerance or not.
One other thing you could do: Log onto the DIY Audio website, Pass section, and post your issues. Papa Pass is really good about supporting the DIY community. He helped me with a bias problem I had with a old Threshold power amp.