Hi!
If I may add to Chris' comments regarding differences in terms of audio, there are none. I did extensive and critical comparisons with my own musical programme and found no difference I can "measure" or experiences I can repeat between the USB and AES/EBU on the BDP-1. What's more, even the BDP-2 with the new BUC board sounds identical. If there are any differences, they are inaudible.
To strengthen my theory, the dealer was kind enough to send me a demo sample of Naim ND5XS which I used to compare it's digital S/PDIF (BNC) output to both BDP-1 and BDP-2 with factory-installed BUC board. The Naim was clearly below the league of Bryston. Naim sounded fine on it's own connected to the DAC but it wasn't the level of detail I was used to. I don't like A-B comparisons but doing one only reinforced my feeling that indeed, Naim sounded slightly veiled but also, in some fashion, rather limited in it's dynamic expression. Quite unexpected I think since I didn't think there would be such a difference between digital transports. But as for BDP-1 and BDP-2, they sounded the same. For all intents and purposes, they are identical.
Uf you don't need conventional digital inputs, by all means go with the BDP-1USB. It will save you some money and will be equally good as either BDP-1 or BDP-2.
I hope this helps!
Cheers!
Antun