Ah yes, the nearfield setup of Cardas; gotcha. I haven't yet tried that, but I hear good things.
So it's over a garage, huh? Hmm... Well, concerning people with carpets I've not yet heard of more ground treatments being added/needed to re-enforce bass response. It's possible that the speakers just aren't in the best spot for in-room bass response (I believe the Cardas method focuses more on sound stage size and superb imaging). Like I always say, the best position in your room for a wide sound stage and pinpoint imaging usually isn't the best spot for in-room bass response. This is why I'd use a subwoofer for 2-channel music, even if I had the HT3's. It's just easier to get the best of both worlds that way. But I am a crazy, anal guy, so...
But enough of my ranting...back to your bass dilemma. Have you tried following the good 'ol method of putting the speakers in the listening position then crawling around the room and listening for the best bass response? This is usually done when trying to place subwoofers, but it works with speakers too. Then you move the speakers to where the bass sounded the best, so long as it's somewhat coordinates with a doable listening position. Also, the Wilson Audio speaker placement method is a good one, though it will take time and probably a helper. Of course, you could do what I do and just experiment with positioning throughout the room to find out if the position is a problem or if it's the room itself. To do this you just place the speakers in various different positions (both short walls and both long walls, and even diagonally if you can), then use yours ears to determine what place gives you the best of both worlds. This won't be an easy task with HT3's, but it will at least let you know if the positioning or room is the problem. Then you tweak from there. It's very similar to the WASP method, but I usually don't drag my wife into helping me.
Here is a link to the WASP method:
http://www.tnt-audio.com/casse/waspe.htmlI hope everything turns out well for you. In that size room, and being above the garage you may run into a few issues, but hopefully none that can't be fixed.