Bob's advice is good. The terminals of the 6.5s can be sandwiched/shorted between the baskets (conductive) & the baffles. Beyond that, as above, remove each 6.5, direct-couple them to your amp, & drive at less than loud levels, checking for noises or whatever. Did the 6.5s ever get replaced? Your idea was good to swap the drivers, but better would have been to do it driver by driver.
You seem to have eliminated your amp as a problem source.
Keep going, you are on the right track. Sorry to hear of the misery. I'm suspecting more the 6.5s than the planars. Here's an interesting idea: try mixing together, via a long jumper cable, the planars of the good side w/ only the 6.5s of the bad side & report back to class (easy to do via the seperate input binding posts).