It's more a little tricky to answer your question. I would assume what you're asking is about the room modes that are causing problems at the listening position, which are still causing a problem after parametric equalization. The presence of a door or window tends to extend the effective length/width of the adjacent dimensions. However, from what you've written, you're trying to address the effects of modes outside of the listening position, since you wrote that you're considering "these locations [that] are far away from the main listening position." If they only cause problems far away from the listening position, why does it matter? Or are you concerned about second-order modes?
Probably easier to address your questions with diagrams and measurements.